miRGator v3.0
a microRNA portal in deep sequencing era
Search keyword(s) : E.g.) let-7a-2
miRNA Info
- Accession No. KP001493
- Chromosome Location chrX:145082571-145082649(-)
- Organism Homo sapiens
- GeneRIF (Gene References Into Functions)
No. miRNA ID NCBI ID Gene References Into Functions Publish Date PubMed Id PubMed Title
Deep Sequencing Data Info
Select the study and sample ID to activate the miR-seq Browser.
No. Sample ID Anatomy Disease Cell Line Sample Title
1 s000001 Brain cortex Human cerebellar cortex rep1 (microRNA-Seq)
2 s000002 Brain cortex Human cerebellar cortex rep2 (microRNA-Seq)
3 s000003 Brain cortex Human superior frontal gyrus rep1 (microRNA-Seq)
4 s000004 Brain cortex Human superior frontal gyrus rep2 (microRNA-Seq)
5 s000005 Megakaryoblast SET2 SET2_RNASeq_1
6 s000006 Umbilical vein endothelial cell HUVEC Normoxic HUVEC_1
7 s000007 Umbilical vein endothelial cell HUVEC Hypoxic HUVEC_1
8 s000008 Umbilical vein endothelial cell HUVEC Normoxic HUVEC_2
9 s000009 Umbilical vein endothelial cell HUVEC Hypoxic HUVEC_2
10 s000010 Epidermis Nodular Tumor 1, lane 1
11 s000011 Epidermis Nodular Tumor 1, lane 2
12 s000012 Epidermis Nodular tumor 2, lane 1
13 s000013 Epidermis Nodular tumor 2, lane 2
14 s000014 Epidermis Nodular tumor 3, lane 1
15 s000015 Epidermis Nodular tumor 3, lane 2
16 s000017 Epidermis Nodular tumor 4, lane 2
17 s000018 Epidermis Nodular tumor 5, lane 1
18 s000020 Epidermis Nodular tumor 6, lane 2
19 s000021 Epidermis Nodular tumor 7, lane 1
20 s000022 Epidermis Nodular tumor 7, lane 2
21 s000023 Epidermis Nodular tumor 8, lane 1
22 s000024 Epidermis Nodular tumor 8, lane 2
23 s000025 Epidermis Infiltrative tumor 1, lane 1
24 s000026 Epidermis Infiltrative tumor 1, lane 2
25 s000028 Epidermis Infiltrative tumor 2, lane 2
26 s000029 Epidermis Infiltrative tumor 3, lane 1
27 s000030 Epidermis Infiltrative tumor 3, lane 2
28 s000031 Epidermis Infiltrative tumor 4, lane 1
29 s000032 Epidermis Infiltrative tumor 4, lane 2
30 s000033 Epidermis Infiltrative tumor 5, lane 1
31 s000035 Epidermis Infiltrative tumor 6, lane 1
32 s000040 Mammary gland glandular cell Breast milk exosomes rep1
33 s000041 Mammary gland glandular cell Breast milk exosomes rep2
34 s000042 Mammary gland glandular cell Breast milk exosomes rep3
35 s000043 Mammary gland glandular cell Breast milk exosomes rep4
36 s000044 B-cell BC-1 BC-1 cells small RNA
37 s000045 B-cell BC-3 BC-3 cells small RNA
38 s000046 Sperm fertile_donor1
39 s000047 Sperm fertile_donor2
40 s000048 Sperm fertile_donor3
41 s000052 Mammary epithelium MCF7 Dicer knock-down, total cell content
42 s000053 Skin Skin psoriasis involved 1
43 s000054 Skin Skin psoriasis involved 2
44 s000055 Skin Skin psoriasis involved 3
45 s000056 Skin Skin psoriasis involved 4
46 s000057 Skin Skin psoriasis involved 5
47 s000058 Skin Skin psoriasis involved 6
48 s000059 Skin Skin psoriasis involved 7
49 s000060 Skin Skin psoriasis involved 8
50 s000061 Skin Skin psoriasis involved 9
51 s000062 Skin Skin psoriasis involved 10
52 s000063 Skin Skin psoriasis involved 11
53 s000064 Skin Skin psoriasis involved 12
54 s000065 Skin Skin psoriasis involved 13
55 s000066 Skin Skin psoriasis involved 14
56 s000067 Skin Skin psoriasis involved 15
57 s000068 Skin Skin psoriasis involved 16
58 s000069 Skin Skin psoriasis involved 17
59 s000070 Skin Skin psoriasis involved 18
60 s000071 Skin Skin psoriasis involved 19
61 s000072 Skin Skin psoriasis involved 20
62 s000073 Skin Skin psoriasis involved 21
63 s000074 Skin Skin psoriasis involved 22
64 s000075 Skin Skin psoriasis involved 23
65 s000076 Skin Skin psoriasis involved 24
66 s000077 Skin Skin psoriasis uninvolved 2
67 s000078 Skin Skin psoriasis uninvolved 3
68 s000079 Skin Skin psoriasis uninvolved 4
69 s000080 Skin Skin psoriasis uninvolved 5
70 s000081 Skin Skin psoriasis uninvolved 6
71 s000082 Skin Skin psoriasis uninvolved 7
72 s000083 Skin Skin psoriasis uninvolved 8
73 s000084 Skin Skin psoriasis uninvolved 9
74 s000085 Skin Skin psoriasis uninvolved 10
75 s000086 Skin Skin psoriasis uninvolved 11
76 s000087 Skin Skin psoriasis uninvolved 12
77 s000088 Skin Skin psoriasis uninvolved 13
78 s000089 Skin Skin psoriasis uninvolved 14
79 s000090 Skin Skin psoriasis uninvolved 15
80 s000091 Skin Skin psoriasis uninvolved 16
81 s000092 Skin Skin psoriasis uninvolved 17
82 s000093 Skin Skin psoriasis uninvolved 18
83 s000094 Skin Skin psoriasis uninvolved 19
84 s000095 Skin Skin psoriasis uninvolved 20
85 s000096 Skin Skin psoriasis uninvolved 21
86 s000097 Skin Skin psoriasis uninvolved 22
87 s000098 Skin Skin psoriasis uninvolved 23
88 s000099 Skin Skin psoriasis uninvolved 24
89 s000100 Skin Skin Normal 1
90 s000101 Skin Skin Normal 2
91 s000102 Skin Skin Normal 3
92 s000103 Skin Skin Normal 4
93 s000104 Skin Skin Normal 5
94 s000107 Skin Skin Normal 8
95 s000108 Skin Skin Normal 9
96 s000109 Skin Skin Normal 10
97 s000110 Skin Skin Normal 11
98 s000111 Skin Skin Normal 12
99 s000112 Skin Skin Normal 13
100 s000113 Skin Skin Normal 14
101 s000115 Skin Skin Normal 16
102 s000116 Skin Skin Normal 17
103 s000117 Skin Skin Normal 18
104 s000118 Skin Skin Normal 19
105 s000121 Fetal lung fibroblast IMR90 IMR90_Senescent
106 s000122 Cervix, Epithelium HeLa S2 HeLa18-30
107 s000123 Cervix, Epithelium HeLa S2 HeLa18-30_RRP40
108 s000126 Cervix, Epithelium HeLa S2 HeLa18-30_XRN1/2
109 s000127 Cervix, Epithelium HeLa S2 HeLa18-30_N
110 s000128 Cervix, Epithelium HeLa S2 HeLa30-100
111 s000131 Cervix, Epithelium HeLa S2 HeLa12-20_N
112 s000132 Adipose tissue hMADS3 AD0 hMADS3 AD0 (1) Adapter A
113 s000133 Adipose tissue hMADS3 AD0 hMADS3 AD0 (2) Adapter A
114 s000134 Adipose tissue hMADS3 AD3 hMADS3 AD3 (1) Adapter A
115 s000135 Adipose tissue hMADS3 AD3 hMADS3 AD3 (2) Adapter A
116 s000136 Adipose tissue hMADS3 AD8 hMADS3 AD8 (1) Adapter A
117 s000137 Adipose tissue hMADS3 AD8 hMADS3 AD8 (2) Adapter A
118 s000138 Prostate Normal prostate
119 s000142 Nasal epithelium, Nasal mucosa ALI-D7, donor 1
120 s000143 Nasal epithelium, Nasal mucosa ALI-D14, donor 1
121 s000144 Nasal epithelium, Nasal mucosa ALI-D21, donor 1
122 s000145 Nasal epithelium, Nasal mucosa ALI-D0, donor 2
123 s000146 Nasal epithelium, Nasal mucosa ALI-D7, donor 2
124 s000147 Nasal epithelium, Nasal mucosa ALI-D14, donor 2
125 s000148 Nasal epithelium, Nasal mucosa ALI-D21, donor 2
126 s000149 Nasal epithelium, Nasal mucosa ALI-D0, donor 3
127 s000150 Nasal epithelium, Nasal mucosa ALI-D7, donor 3
128 s000151 Nasal epithelium, Nasal mucosa ALI-D14, donor 3
129 s000152 Nasal epithelium, Nasal mucosa ALI-D21, donor 3
130 s000153 Nasal mucosa Basal cells, donor 1
131 s000156 Nasal mucosa Columnar cells, donor 1
132 s000157 Nasal mucosa Columnar cells, donor 2
133 s000159 Mammary gland Breast_Normal_101
134 s000160 Mammary gland Breast_Normal_105A
135 s000167 Mammary gland Breast_Normal_95A
136 s000177 Mammary gland Breast_Apocrine_149
137 s000179 Mammary gland Breast_Apocrine_170
138 s000191 Mammary gland 196 Breast_Cell Line_196
139 s000192 Mammary gland 197 Breast_Cell Line_197
140 s000193 Mammary gland 192A Breast_Cell Line_192A
141 s000203 Mammary gland Breast_DCIS_12
142 s000206 Mammary gland Breast_DCIS_17
143 s000215 Mammary gland Breast_DCIS_18B
144 s000216 Mammary gland Breast_DCIS_5B
145 s000217 Mammary gland Breast_DCIS_9B
146 s000228 Mammary gland Breast_IDC_44
147 s000232 Mammary gland Breast_IDC_81A
148 s000238 Mammary gland Breast_IDC_28A
149 s000251 Mammary gland Breast_IDC_176
150 s000253 Mammary gland Breast_IDC_107A
151 s000255 Mammary gland Breast_IDC_109
152 s000262 Mammary gland Breast_IDC_177
153 s000270 Mammary gland Breast_IDC_32B
154 s000285 Mammary gland Breast_IDC_31B
155 s000288 Mammary gland Breast_IDC_123
156 s000306 Mammary gland Breast_IDC_164
157 s000325 Mammary gland Breast_IDC_124A
158 s000329 Mammary gland Breast_IDC_27A
159 s000333 Mammary gland Breast_IDC_57A
160 s000335 Mammary gland Breast_IDC_65A
161 s000341 Mammary gland Breast_IDC_92A
162 s000353 Mammary gland Breast_IDC_93A
163 s000355 Mammary gland Breast_IDC_52A
164 s000356 Mammary gland Breast_IDC_69A
165 s000357 Mammary gland Breast_IDC_48
166 s000359 Mammary gland Breast_IDC_59
167 s000363 Mammary gland Breast_IDC_73
168 s000370 Mammary gland Breast_IDC_71
169 s000371 Mammary gland Breast_IDC_74
170 s000380 Mammary gland Breast_IDC_167B
171 s000382 Mammary gland Breast_IDC_31C
172 s000385 Mammary gland Breast_IDC_45C
173 s000391 Mammary gland Breast_ILC_40
174 s000402 Mammary gland Breast_Metaplastic_166B
175 s000404 Endometrium LH+2
176 s000405 Endometrium LH+7
177 s000406 Endometrium hCG+4
178 s000407 Endometrium hCG+7
179 s000409 B-cell GC136 Germinal Center B cell (GC136)
180 s000413 B-cell GC40 Germinal Center B cell (GC40)
181 s000416 B-cell GCB385 GCB DLBCL (GCB385)
182 s000417 B-cell GCB110 GCB DLBCL (GCB110)
183 s000418 B-cell Ly3 Ly3 cell line (Ly3)
184 s000421 B-cell BL115 Burkitt Lymphoma (BL115)
185 s000424 B-cell MCL114 Mentle Cell Lymphoma (MCL114)
186 s000427 B-cell KMS12 KMS12 cell line (KMS12)
187 s000429 B-cell L1236 L1236 cell line (L1236)
188 s000430 B-cell L428 L428 cell line (L428)
189 s000432 B-cell CLLM633 Mututated CLL (CLLM633)
190 s000433 B-cell MALT413 MALT (MALT413)
191 s000434 B-cell Splenic414 splenic MZL (Splenic414)
192 s000435 B-cell ALL411 Lymphoblastic (ALL411)
193 s000436 B-cell ABC158 6hr Activated B cell line (ABC158)
194 s000438 B-cell HIV412 HIV-positive DL (HIV412)
195 s000439 B-cell, Tonsil germinal center Human centroblast [09-001]
196 s000441 B-cell, Tonsil germinal center Human pre-germinal center B cell [09-001]
197 s000444 B-cell, Tonsil Human memory B cell [09-001]
198 s000446 Nasopharynx 5-8F 5-8F_cytoplasm
199 s000447 Peripheral blood monocyte THP-1 THP1_nuc_sRNAs
200 s000449 Peripheral blood monocyte THP-1 THP1_total_sRNAs
201 s000450 Frontal cortex Illumina: Human-superior frontal gyrus-2 day old
202 s000454 Frontal cortex Illumina: Human-superior frontal gyrus-53 years 112 days old
203 s000455 Frontal cortex Illumina: Human-superior frontal gyrus-25 years 152 day old
204 s000457 Frontal cortex Illumina: Human-superior frontal gyrus-80 years old
205 s000458 Frontal cortex Illumina: Human-superior frontal gyrus-13 years 360 days old
206 s000461 Frontal cortex Illumina: Human-superior frontal gyrus-98 years old rep2
207 s000462 Frontal cortex Illumina: Human-superior frontal gyrus-88 years old
208 s000463 Frontal cortex Illumina: Human-superior frontal gyrus-66 years old
209 s000470 Cervix G652N
210 s000476 Cervix G871N
211 s000480 Cervix G601N
212 s000481 Cervix G727N
213 s000483 Cervix G648N
214 s000486 Cervix G701N
215 s000488 Cervix G575N
216 s000489 Cervix G613N
217 s000491 Cervix G026N
218 s000493 Cervix G603N
219 s000494 Cervix G001N
220 s000496 Cervix G531N
221 s000497 Cervix G612N
222 s000502 Cervix G850T
223 s000503 Cervix G576T
224 s000505 Cervix G727T
225 s000506 Cervix G529T
226 s000510 Cervix G575T
227 s000511 Cervix G613T
228 s000512 Cervix G026T
229 s000513 Cervix G013T
230 s000515 Cervix G001T
231 s000516 Cervix G243T
232 s000517 Cervix G531T
233 s000521 Cervix G547T
234 s000523 Cervix G659T
235 s000527 Cervix G220T
236 s000529 Cervix G701T
237 s000530 Epithelium, embryonic kidney HEK293 293GFP
238 s000534 Epithelium, embryonic kidney HEK293 293cand3
239 s000535 Epithelium, embryonic kidney HEK293 293cand1
240 s000536 Epithelium, embryonic kidney HEK293 293cand2
241 s000540 Epithelium, embryonic kidney HEK293 293DroshaTN
242 s000541 Epithelium, embryonic kidney HEK293 293DroshaTN_cand5
243 s000542 Epithelium, embryonic kidney HEK293 293DcrTN
244 s000543 Epithelium, embryonic kidney HEK293 293DcrTN_cand5
245 s000545 Liver Human Normal Liver Tissue Sample 2
246 s000549 Liver HBV(+) Distal Tissue Sample 1
247 s000550 Liver HBV(+) Adjacent Tissue Sample 1
248 s000551 Liver HBV(+) Side Tissue Sample 1
249 s000552 Liver HBV(+) HCC Tissue Sample 1
250 s000554 Liver HBV(+) HCC Tissue Sample 2
251 s000555 Liver HCV(+) Adjacent Tissue Sample
252 s000556 Liver HCV(+) HCC Tissue Sample
253 s000557 Liver HBV(-) HCV(-) Adjacent Tissue Sample
254 s000558 Liver HBV(-) HCV(-) HCC Tissue Sample
255 s000559 Melanocyte QF1160MB QF1160MB
256 s000561 Melanocyte MM653 MM653
257 s000568 Melanocyte MM466 MM466
258 s000571 Fibroblast AG01522 fibroblasts_cell_culture
259 s000572 Epithelium, Mammary gland MCF7 MCF7_smallRNAseq
260 s000573 Cervix, Epithelium HeLa HeLa
261 s000574 Epithelium, Bone U2OS U2OS
262 s000575 Bone 143B 143B
263 s000577 Epithelium, Lung H520 H520
264 s000578 Epithelium, Colon SW480 SW480
265 s000579 Colon DLD2 DLD2
266 s000580 Epithelium, Mammary gland MCF7 MCF7
267 s000581 Mammary gland MB-MDA231 MB-MDA231
268 s000589 Nasopharynx healthy control tissue from patient2 (male)
269 s000598 Foreskin fibroblast smRNA_infected_24h
270 s000600 Embryonic lung fibroblast WI-38 Endogenous small RNAs from human senescent fibroblast WI-38
271 s000601 Embryonic lung fibroblast WI-38 immunoprecipitating small RNA with an antibody againt AGO proteins from human senescent fibroblast WI-38
272 s000602 Embryonic lung fibroblast WI-38 immunoprecipitating small RNA with an antibody againt H3K9me2 proteins from human senescent fibroblast WI-38
273 s000603 Heart right atrium miRNA_RA_1
274 s000604 Heart left atrium miRNA_LA_1
275 s000605 Heart right atrium miRNA_RA_2
276 s000606 Heart left atrium miRNA_LA_2
277 s000607 Heart right atrium miRNA_RA_3
278 s000608 Heart left atrium miRNA_LA_3
279 s000609 Heart right atrium miRNA_RA_4
280 s000610 Heart left atrium miRNA_LA_4
281 s000611 Cervix, Epithelium HeLa HeLa sRNA mock sRNA
282 s000612 Cervix, Epithelium HeLa HeLa ELAV1/HuR sRNA siRNA1
283 s000613 Cervix, Epithelium HeLa HeLa ELAV1/HuR sRNA siRNA2
284 s000616 Embryonic stem cell H1 (WA01) smRNA-Seq analysis of H1EScd1, HS1295-1_42ERCAAXX
285 s000617 Mammary epithelium smRNA-Seq analysis of HS1740; HS1740-1_430N8AAXX
286 s000618 Neural stem cell, Brain cortex smRNA-Seq Brain-Neurospheres; M01579-1
287 s000619 Neural stem cell, Brain cortex smRNA-Seq Brain-Neurospheres; M01578-1
288 s000620 Neural stem cell, Brain cortex smRNA-Seq Brain-Neurospheres; M01577-1
289 s000621 Brain smRNA-Seq Brain-Germinal Matrix; M01576-1
290 s000622 Brain smRNA-Seq Brain-Germinal Matrix; M01586-1
291 s000623 Fetal Brain smRNA-Seq Brain; M01582-1
292 s000624 Fetal Brain smRNA-Seq Brain; M01581-1
293 s000625 Neural stem cell, Brain cortex smRNA-Seq Brain-Neurospheres; M01580-1
294 s000629 Embryonic stem cell EAVES058
295 s000630 Embryonic stem cell EAVES059
296 s000632 Cervix, Epithelium HeLa Hela 24 hrs after transfection with splicing factor SF2/ASF
297 s000634 Cervix, Epithelium HeLa Hela 72 hrs after transfection with splicing factor SF2/ASF
298 s000638 Monocyte THP-1 THP-1 whole cell RNA, no treatment
299 s000640 Monocyte THP-1 THP-1 whole cell RNA, after 3 day treatment with PAPD5 siRNA transfection
300 s000641 Monocyte THP-1 THP-1 whole cell RNA, after 3 day treatment with PAPD7 siRNA transfection
301 s000643 Monocyte THP-1 Isolation of RNA following immunoprecipitation by anti-AGO1 antibody from THP-1 cells
302 s000646 Embryonic fibroblast 552
303 s000647 Embryonic fibroblast 553
304 s000648 Embryonic fibroblast 554
305 s000650 Embryonic fibroblast 556
306 s000651 Embryonic fibroblast 557
307 s000652 Embryonic fibroblast 558
308 s000653 Embryonic fibroblast 559
309 s000654 Embryonic fibroblast 560
310 s000655 Embryonic fibroblast 561
311 s000656 Cervix, Epithelium HeLa miRNA profile vs mRNA diversity
312 s000657 Heart WTAK_heart
313 s000659 Heart SREK_Heart_25bp
314 s000660 Lung WTAK_Lung
315 s000661 Lung SREK_Lung
316 s000662 Lung SREK_Lung_25bp
317 s000663 Thymus WTAK_Thymus
318 s000664 Thymus SREK_Thymus
319 s000665 Thymus SREK_Thymus_25bp
320 s000666 Testis WTAK_Testes
321 s000667 Testis SREK_Testes
322 s000668 Testis SREK_Testes_25bp
323 s000669 Spleen WTAK_Spleen
324 s000671 Spleen SREK_Spleen_25bp
325 s000672 Kidney WTAK_Kidney
326 s000673 Kidney SREK_Kidney
327 s000674 Kidney SREK_Kidney_25bp
328 s000675 Liver WTAK_Liver
329 s000678 Ovary WTAK_Ovary
330 s000679 Ovary SREK_Ovary
331 s000681 Brain Brain_25bp
332 s000682 Placenta SREK_Placenta
333 s000690 Lymphoblast GM12878 CSHL_RnaSeq_K562_cytosol_TAP-Only_shortTotal
334 s000693 Embryonic stem cell H1-hESC CSHL_RnaSeq_K562_chromatin_TAP-Only_shortTotal
335 s000705 Lung Pat1N
336 s000706 Lung Pat1T
337 s000707 Lung Pat3N
338 s000708 Lung Pat3T
339 s000709 Lung Pat4N
340 s000711 Lung Pat5N
341 s000712 Lung Pat5T
342 s000713 Lung Pat6N
343 s000714 Lung Pat6T
344 s000715 Lung Pat8N
345 s000716 Lung Pat8T
Sample ID
No.
Disease
Sample Title
Total Count :            0
Expression
     hsa-mir-891b / hsa-miR-891b ( Canonical mature form in red )
Normal
Tumor
     hsa-mir-891b / hsa-miR-891b ( Canonical mature form in red )
Normal
     hsa-mir-891b / hsa-miR-891b ( Canonical mature form in red )
Normal